TitleA population-based study of precision health assessments using multi-omics network-derived biological functional modules
AuthorsZhang, Wei
Wan, Ziyun
LI, Xiaoyu
LI, Rui
Luo, Lihua
Song, Zijun
Miao, Yu
Li, Zhiming
Wang, Shiyu
Shan, Ying
Li, Yan
Chen, Bangwei
Zhen, Hefu
Sun, Yuzhe
Fang, Mingyan
Ding, Jiahong
Yan, Yizhen
Zong, Yang
Wang, Zhen
Zhang, Wenwei
Yang, Huanming
Yang, Shuang
Wang, Jian
Jin, Xin
Wang, Ru
Chen, Peijie
Min, Junxia
Zeng, Yi
Li, Tao
Xu, Xun
Nie, Chao
AffiliationBGI Shenzhen, Shenzhen 518083, Peoples R China
China Natl GeneBank, Shenzhen 518120, Peoples R China
Zhejiang Univ, Affiliated Hosp 1, Inst Translat Med, Sch Med, Hangzhou, Peoples R China
Peking Univ, Ctr Hlth Aging & Dev Studies, Natl Sch Dev, Beijing, Peoples R China
Shanghai Univ Sport, Sch Exercise & Hlth, Shanghai Frontiers Sci Res Base Exercise & Metab H, Shanghai, Peoples R China
Univ Chinese Acad Sci, BGI Educ Ctr, Shenzhen 518083, Peoples R China
James D Watson Inst Genome Sci, Hangzhou 310058, Peoples R China
South China Univ Technol, Sch Biol & Biol Engn, Guangzhou 510006, Peoples R China
KeywordsINTIMA-MEDIA THICKNESS
COMMUNITY STRUCTURE
GUT MICROBIOTA
CAROTID PLAQUE
ASSOCIATION
TAURINE
SCALE
TOOL
Issue Date20-Dec-2022
PublisherCELL REPORTS MEDICINE
AbstractRecent technological advances in multi-omics and bioinformatics provide an opportunity to develop preci-sion health assessments, which require big data and relevant bioinformatic methods. Here we collect multi-omics data from 4,277 individuals. We calculate the correlations between pairwise features from cross-sectional data and then generate 11 biological functional modules (BFMs) in males and 12 BFMs in fe-males using a community detection algorithm. Using the features in the BFM associated with cardiometa-bolic health, carotid plaques can be predicted accurately in an independent dataset. We developed a model by comparing individual data with the health baseline in BFMs to assess health status (BFM-ash). Then we apply the model to chronic patients and modify the BFM-ash model to assess the effects of consuming grape seed extract as a dietary supplement. Finally, anomalous BFMs are identified for each subject. Our BFMs and BFM-ash model have huge prospects for application in precision health assessment.
URIhttp://hdl.handle.net/20.500.11897/668384
ISSN2666-3791
DOI10.1016/j.xcrm.2022.100847
IndexedSCI(E)
Appears in Collections:国家发展研究院

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